Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810861.1_cds_XP_016496420.1_10644
CDS Infomation

[gene=LOC107815364] [db_xref=GeneID:107815364] [protein=putative Peroxidase 48] [protein_id=XP_016496420.1] [location=complement(join(215631..216142,216247..216412,216539..216727,217422..217862))] [gbkey=CDS]
Sequence

ATGCTCAAAACCGCCTTCTTCTCAAAGCTATCAAAAAAATCTCGCAAGTTTCAATTTGCC
ATGGATTTTACACGGAAATTGAGCTTTCTAGTGTTTCTGTTGTGTATTCTCATCTCTTTG
CAGAACCAAGACGACATTGATACAAATAACAATTTTTCTTCTCATGACGACAAATATTGC
TCCTTATCTGATGATGAATCTCAGTATATCTTCGATATTGACTCGTTTCCGCCTCTTCCT
ATGTTTGCTACTACTTCTCATGTGGAGAGGAAGCTCCAACAACAAACAGGGGCTCGGGAA
TCCCTGAAATACGATTACTATCATCAAACTTGTCCTCAAGCTGAGCGAATCATCCGATCA
AGTGTTCGAGATCTTTTCAAAAAGCGACCACAGATTGCTCCTGCTTTGTTGAGACTTGCT
TTCCACGACTGCTTTGTTGAGGGGTGTGATGCATCAGTTTTACTGGACCCTGCTGAAGGA
TTTCATAGCGAGAAAGAATCTCCTCCCAACGAATCATTGAAGGGCTTCGACGTAATAGAT
ATCATTAAATCAGAGCTTGAAGAAGCTTGTCCAGGAGTTGTTTCTTGCGCTGATGCTGTT
GTTTTGGCTGCTAGAGAAAGTGTTATTTTGACTGGTGGCCCTTTCTACCCGCTGAAAACA
GGAAGGAGAGACAGTGTGGCTTCCTTCGGAGAAATTGCAACTTTTGAGCTTCCTAGTCCT
CAGGATGATCTTTCCAAGATGATTGAGTCATTCTCATCCAAAGGTTTCGACGAAAGGGAG
GCAGTAAGCCTCTTAGGTGCTCACAGCACTGGAGTGATCCACTGCAAATTCTTCATCAAC
AGGCTCTACAACTTCAGCGGGACTAATAGCTCCGACCCTACTATGAACTCGGAGTTTGTC
AGTCTCTTGAGGTCCAAATGCAACACAAATCAAGCCTCTTTGATGTCGCCTGCATCAAAA
TCACAATCGCCATCCCAACTAGTTTCATCATCGCCTTCACCATCATCTATTATCGATGAA
TTAGCATCTGCACTGGTTGAGGAGCCAGCAATGAAGATGGACTACGAAGGACCAGGAGCA
AATTTTGGTACACTATATTTCCGCAGTCTTCTACAAGGCAGGGGAATACTCTATGTGGAT
CAGCAGCTGACTGCAGGGGAAGAAACTAAAACTTGGGTCCAAGCTTATGCTTCAGATGTG
TCTTTGTTTCACAAAGATTTCGGTTTGGTAATGATGAAGCTTTCCAACTTGGGAGTCCTC
ACTGCACCAATGGGACAGGTGCGCAAAGATTGCCGGAAAGTTTCCTGA

Peptide Sequence

PEP ID

XP_016496420.1
PEP Infomation

PREDICTED: putative Peroxidase 48 [Nicotiana tabacum]
Sequence

MLKTAFFSKLSKKSRKFQFAMDFTRKLSFLVFLLCILISLQNQDDIDTNNNFSSHDDKYC
SLSDDESQYIFDIDSFPPLPMFATTSHVERKLQQQTGARESLKYDYYHQTCPQAERIIRS
SVRDLFKKRPQIAPALLRLAFHDCFVEGCDASVLLDPAEGFHSEKESPPNESLKGFDVID
IIKSELEEACPGVVSCADAVVLAARESVILTGGPFYPLKTGRRDSVASFGEIATFELPSP
QDDLSKMIESFSSKGFDEREAVSLLGAHSTGVIHCKFFINRLYNFSGTNSSDPTMNSEFV
SLLRSKCNTNQASLMSPASKSQSPSQLVSSSPSPSSIIDELASALVEEPAMKMDYEGPGA
NFGTLYFRSLLQGRGILYVDQQLTAGEETKTWVQAYASDVSLFHKDFGLVMMKLSNLGVL
TAPMGQVRKDCRKVS

Transcript Sequence

Gene sequence data has not been registered.